BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB037C05SP1|AL430363
(656 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1758 313 3e-85
>3x_Contig1758
Length = 25930
Score = 313 bits (153), Expect = 3e-85
Identities = 414/503 (82%), Gaps = 4/503 (0%)
Strand = Plus / Minus
Query: 148 tctttmatccatcaaacattccacacaatcatccaacamatccaccataatctcaacamc 207
||||| ||| || ||||||||||||||||||| |||| ||| | ||||| |||||| |
Sbjct: 7114 tctttaatcgatgaaacattccacacaatcatggaacaaatcgaggataatgtcaacagc 7055
Query: 208 aaatccaaacctaaatccaatcatcaccacaccaaactactccatatatccaammmttca 267
||||| ||||||||||| ||| || || |||||||| || || |||||||||| ||||
Sbjct: 7054 aaatcgaaacctaaatcgaatgatgacgacaccaaagtagtcgatatatccaaaaattca 6995
Query: 268 tatcaaatcccattattctctatccccacmaaacactccacaaacgcamatcttcamacc 327
||||||||| |||||||||||||| |||| ||| ||| |||||||| | || || | | |
Sbjct: 6994 tatcaaatcgcattattctctatcgccacgaaagactgcacaaacg-aaatgttgaaagc 6936
Query: 328 cccactcctatcaatcaacaacaacttcctacacamactacactccatctcgcccacttc 387
|||| ||||||| |||||||| |||||||| | |||||||||||||||| | ||||
Sbjct: 6935 gggactcgtatcaatgaacaacaagttcctacagaaactacactccatctcggc-acttg 6877
Query: 388 acgcatctcactccatccctatatactaacttccctctatcamaaccttacttccccctc 447
||| |||||| | ||| | |||||| ||||||| ||||| | |||||||||| |||||
Sbjct: 6876 acg-atctcagtgcatgcgtatatagtaacttcggtctatgaaaaccttacttggccctc 6818
Query: 448 cattcaamtactmahatccctccataccctctatctmcatacttctatamttaaccttac 507
||||||| |||| | ||| ||||||||| | ||| | ||| ||||||| ||||| ||||
Sbjct: 6817 cattcaagtactgaaatcgctccataccgtgtatgtagatagttctatagttaacgttac 6758
Query: 508 tctttcactcccactaccccctttctcttcctctttctttaatccccacctcatcataat 567
||||||||| |||||| ||||||||||| |||||||||| |||| | ||||||||
Sbjct: 6757 tctttcactggcactacggggtttctcttcctgtttctttaatggccacgtgatcataat 6698
Query: 568 tttcttttccttaacctcaaataaccaaaacaatccaattcccaacacgcttmtcaatca 627
|||||||||||||| ||||||||| |||| |||| ||||||||||| | || |||||||
Sbjct: 6697 tttcttttccttaaggtcaaataacgaaaagaatcgaattcccaaca-ggttgtcaatca 6639
Query: 628 acatcttatacatctcacttaat 650
|||| |||||||||||| |||||
Sbjct: 6638 acatgttatacatctcagttaat 6616
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.42 0.717 1.34
Gapped
Lambda K H
1.42 0.717 1.34
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 3888
Number of Sequences: 1807
Number of extensions: 3888
Number of successful extensions: 94
Number of sequences better than 1.0e-20: 1
length of query: 656
length of database: 10,358,551
effective HSP length: 16
effective length of query: 640
effective length of database: 10,329,639
effective search space: 6610968960
effective search space used: 6610968960
T: 0
A: 40
X1: 5 (10.2 bits)
X2: 14 (28.6 bits)
S1: 11 (23.0 bits)
S2: 49 (100.7 bits)